NicheMapR – an R package for biophysical modelling: the ectotherm and Dynamic Energy Budget models

Abstract

Mechanistic niche models characterise the fundamental niche of an organism by determining thermodynamic constraints on its heat, water and nutritional budget, and the consequences of this for growth, development and reproduction. They can thus quantify constraints on survival, activity and, ultimately, the vital rates that determine population growth, given a sequence of environmental conditions and the key morphological, physiological and behavioural functional traits. Here we introduce and document the ectotherm model of NicheMapR, an R package that includes a suite of programs for the mechanistic modelling of heat, water, energy and mass exchange between any kind of ectothermic organism a..